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  5. Solyc03g005580.2.1

Solyc03g005580.2.1 (CRU1, CRA1, ATCRA1,...)


Aliases : CRU1, CRA1, ATCRA1, Solyc03g005580

Description : no description available(sp|a0a1l6k371|jugn4_jugni : 439.0)


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g005580.2.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00162390 evm_27.TU.AmTr_v1... Glutelin type-D 1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00067p00027690 evm_27.TU.AmTr_v1... 11S globulin seed storage protein 2 OS=Sesamum indicum 0.04 OrthoFinder output from all 47 species
AT1G03880 CRU2, CRB cruciferin 2 0.05 OrthoFinder output from all 47 species
AT1G03890 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28520 CRU3, CRC cruciferin 3 0.04 OrthoFinder output from all 47 species
AT5G44120 CRU1, CRA1, ATCRA1 RmlC-like cupins superfamily protein 0.04 OrthoFinder output from all 47 species
Aop_g17109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26224 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Aop_g29046 CRU3, CRC Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Aop_g67915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70635 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34023.t1 Aspi01Gene34023 Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47425.t1 Aspi01Gene47425 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011190 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011191 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0010.g012318 No alias Globulin-type seed storage protein & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038308 No alias Globulin-type seed storage protein *(CR) & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0104.g044758 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0152.g053400 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0152.g053408 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.15G030600.1 CRU2, CRB,... Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G030700.1 CRU2, CRB,... Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Dac_g10197 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Dde_g05793 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022907001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01028337001 CRU1, CRA1, ATCRA1 11S globulin subunit beta OS=Cucurbita maxima 0.07 OrthoFinder output from all 47 species
GSVIVT01028338001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.06 OrthoFinder output from all 47 species
GSVIVT01028341001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.06 OrthoFinder output from all 47 species
GSVIVT01030613001 No alias Glutelin type-D 1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Gb_01530 CRU2, CRB no description available(sp|a0a222nnm9|cos1_cocnu : 359.0) 0.03 OrthoFinder output from all 47 species
Gb_12801 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 216.0) 0.03 OrthoFinder output from all 47 species
Gb_18954 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 172.0) 0.03 OrthoFinder output from all 47 species
Gb_26731 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 216.0) 0.03 OrthoFinder output from all 47 species
Gb_26733 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 139.0) 0.05 OrthoFinder output from all 47 species
Gb_30214 CRU1, CRA1, ATCRA1 no description available(sp|a0a1l6k371|jugn4_jugni : 301.0) 0.04 OrthoFinder output from all 47 species
LOC_Os08g03410.1 CRU1, CRA1,... no description available(sp|a0a222nnm9|cos1_cocnu : 326.0) 0.03 OrthoFinder output from all 47 species
LOC_Os09g37958.1 LOC_Os09g37958 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os09g37976.1 LOC_Os09g37976 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g07654 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Len_g37579 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
MA_3821g0010 No alias 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.03 OrthoFinder output from all 47 species
MA_7329469g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8424978g0010 CRU3, CRC no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g18470.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20774 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g15802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39838 CRU3, CRC not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43224 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g43844 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Ore_g43845 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Ore_g43871 No alias Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15974 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g25554 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g25952 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001159 No alias Globulin-type seed storage protein & original... 0.03 OrthoFinder output from all 47 species
Smo127584 No alias 11S globulin seed storage protein 2 OS=Sesamum indicum 0.04 OrthoFinder output from all 47 species
Smo270393 No alias Glutelin type-D 1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc11g073210.2.1 Solyc11g073210 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Spa_g43375 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18476 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e027621_P002 Zm00001e027621 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 55 211
IPR006045 Cupin_1 323 469
No external refs found!