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  5. Solyc03g005000.4.1

Solyc03g005000.4.1 (Solyc03g005000)


Aliases : Solyc03g005000

Description : zinc metalloprotease (PGM48)


Gene families : OG0007941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g005000.4.1

Target Alias Description ECC score Gene Family Method Actions
AT3G27110 No alias Peptidase family M48 family protein 0.08 OrthoFinder output from all 47 species
Adi_g115621 No alias zinc metalloprotease *(PGM48) & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g10686 No alias zinc metalloprotease *(PGM48) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00655 No alias zinc metalloprotease *(PGM48) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26908 No alias zinc metalloprotease *(PGM48) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19810 No alias zinc metalloprotease *(PGM48) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G043600.1 Ceric.19G043600 zinc metalloprotease *(PGM48) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.171 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
Cre14.g620150 No alias Protein degradation.peptidase families.metallopeptidase... 0.01 OrthoFinder output from all 47 species
Dac_g45945 No alias zinc metalloprotease *(PGM48) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03714 No alias zinc metalloprotease *(PGM48) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07047 No alias zinc metalloprotease *(PGM48) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01033097001 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
LOC_Os01g73910.1 LOC_Os01g73910 zinc metalloprotease (PGM48) 0.07 OrthoFinder output from all 47 species
Msp_g01045 No alias zinc metalloprotease *(PGM48) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17470 No alias zinc metalloprotease *(PGM48) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g04383 No alias zinc metalloprotease *(PGM48) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g09361 No alias zinc metalloprotease *(PGM48) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12096 No alias zinc metalloprotease *(PGM48) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24488 No alias zinc metalloprotease *(PGM48) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e017196_P001 Zm00001e017196 zinc metalloprotease (PGM48) 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001915 Peptidase_M48 99 292
No external refs found!