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  5. Solyc02g093920.2.1

Solyc02g093920.2.1 (CSN3, FUS11, COP13,...)


Aliases : CSN3, FUS11, COP13, Solyc02g093920

Description : component CSN3 of COP9 signalosome complex


Gene families : OG0005199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g093920.2.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene46949.t1 CSN3, FUS11,... component *(CSN3) of COP9 signalosome complex & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001374.12 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre16.g671100 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01001824001 CSN3, FUS11, COP13 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os08g02550.1 CSN3, FUS11,... component CSN3 of COP9 signalosome complex 0.03 OrthoFinder output from all 47 species
Mp1g03910.1 CSN3, FUS11, COP13 component CSN3 of COP9 signalosome complex 0.03 OrthoFinder output from all 47 species
Msp_g01564 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.02 OrthoFinder output from all 47 species
Smo167575 CSN3, FUS11, COP13 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder output from all 47 species
Zm00001e021822_P002 CSN3, FUS11,... component CSN3 of COP9 signalosome complex 0.03 OrthoFinder output from all 47 species
Zm00001e029231_P001 CSN3, FUS11,... component CSN3 of COP9 signalosome complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 259 360
No external refs found!