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  5. Solyc02g090790.1.1

Solyc02g090790.1.1 (RRTF1, Solyc02g090790)


Aliases : RRTF1, Solyc02g090790

Description : transcription factor (ERF)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g090790.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00218200 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF015... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00088760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
AMTR_s00077p00141890 CRF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.16 OrthoFinder output from all 47 species
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G11140 CRF1 cytokinin response factor 1 0.02 OrthoFinder output from all 47 species
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G44210 ATERF-9, ERF9, ATERF9 erf domain protein 9 0.01 OrthoFinder output from all 47 species
Aev_g31370 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18871 No alias subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19433 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05905 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g36635 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g39098 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g46307 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g48568 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52359 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g05603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09316 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g14409 No alias subgroup ERF-I transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57065.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000553 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034097 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g06839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G023400.1 Ceric.06G023400 subgroup ERF-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G055400.1 Ceric.10G055400 not classified & original description: pacid=50611842... 0.03 OrthoFinder output from all 47 species
Ceric.16G026600.1 Ceric.16G026600 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z027000.1 ERF110, Ceric.1Z027000 not classified & original description: pacid=50632868... 0.07 OrthoFinder output from all 47 species
Ceric.28G014900.1 Ceric.28G014900 subgroup ERF-I transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.34G045400.1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G020100.1 Ceric.37G020100 subgroup ERF-X transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre16.g649433 RAP2.2 No description available 0.01 OrthoFinder output from all 47 species
Dac_g07566 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37692 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g03411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02021 RAP2.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04281 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g06699 Rap2.6L not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27365 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01009801001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.19 OrthoFinder output from all 47 species
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
GSVIVT01021146001 ERF-1, ATERF-1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_00745 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Gb_02790 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_20395 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_41294 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g34260.1 Rap2.6L, LOC_Os02g34260 transcription factor (ERF) 0.09 OrthoFinder output from all 47 species
LOC_Os02g34270.1 ERF110, LOC_Os02g34270 Ethylene-responsive transcription factor ERF114... 0.07 OrthoFinder output from all 47 species
LOC_Os02g43820.1 ERF5, ATERF-5,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g09170.1 RAP2.4, LOC_Os03g09170 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34970.1 ERF110, LOC_Os04g34970 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os05g36100.1 ERF110, LOC_Os05g36100 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os06g07030.1 RAP2.9, DEAR5,... transcription factor (DREB) 0.17 OrthoFinder output from all 47 species
LOC_Os08g45110.1 LOC_Os08g45110 transcription factor (DREB) 0.14 OrthoFinder output from all 47 species
Len_g02969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08584 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12891 ERF2, ATERF2, ATERF-2 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13204 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22025 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g57821 Rap2.6L not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g20776 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Lfl_g22775 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g27912 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Lfl_g30898 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
MA_162045g0010 DREB26 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_166248g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_4182g0010 Rap2.6L no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Mp1g20040.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Mp5g01050.1 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Msp_g27431 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Nbi_g11442 No alias subgroup ERF-V transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g12944 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ore_g25668 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26909 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22604 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g25395 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g26637 tny not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33101 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010831 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012659 No alias not classified & original description: CDS=1-1455 0.03 OrthoFinder output from all 47 species
Solyc01g009440.3.1 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc02g067020.1.1 RAP2.11, Solyc02g067020 transcription factor (ERF). transcription factor (ERN1) 0.01 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g078180.1.1 ERF2, ATERF2,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc08g078410.2.1 Solyc08g078410 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Solyc09g089910.1.1 Solyc09g089910 transcription factor (ERF). transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc12g009490.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Spa_g25423 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g39600 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56350 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Tin_g16261 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003858_P001 Zm00001e003858 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e004208_P001 Zm00001e004208 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e007351_P001 ERF-6-6, ERF6,... transcription factor (ERF) 0.08 OrthoFinder output from all 47 species
Zm00001e015219_P001 Zm00001e015219 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e015314_P001 ERF5, ATERF-5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e020274_P001 TMO3, CRF2,... transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Zm00001e023149_P001 ERF5, ATERF-5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023759_P001 Zm00001e023759 Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
Zm00001e023804_P001 DREB26, Zm00001e023804 Ethylene-responsive transcription factor ERF013... 0.02 OrthoFinder output from all 47 species
Zm00001e031497_P001 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e032483_P001 Zm00001e032483 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e036401_P001 DEAR3, Zm00001e036401 transcription factor (DREB) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 100 149
No external refs found!