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  5. Solyc02g090130.4.1

Solyc02g090130.4.1 (Solyc02g090130)


Aliases : Solyc02g090130

Description : no hits & (original description: none)


Gene families : OG0003819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g090130.4.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00194330 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT3G50380 No alias Protein of unknown function (DUF1162) 0.08 OrthoFinder output from all 47 species
Azfi_s0016.g014215 No alias not classified & original description: CDS=1-8898 0.03 OrthoFinder output from all 47 species
GSVIVT01005092001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_10941 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10437277g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10437277g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g48681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017189 No alias not classified & original description: CDS=326-9778 0.03 OrthoFinder output from all 47 species
Sam_g17474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR009543 VPS13_VAB 853 997
IPR031645 VPS13_DH-like 1321 1460
No external refs found!