Solyc02g089280.3.1 (Solyc02g089280)

Aliases : Solyc02g089280

Description : SSU processome assembly factor (IMP3)

Gene families : OG0006323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006323_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g089280.3.1
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020510.74	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species
Cre03.g170750	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species
GSVIVT01036537001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
LOC_Os04g56670.2	LOC_Os04g56670	SSU processome assembly factor (IMP3)	0.04	OrthoFinder output from all 47 species
Mp3g02070.1	No alias	SSU processome assembly factor (IMP3)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0019843	rRNA binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001912	Ribosomal_S4/S9_N	3	62
IPR002942	S4_RNA-bd	107	153

External Links

No external refs found!