Aliases : Solyc02g088650
Description : Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana (sp|q9flz9|pp405_arath : 720.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00181560 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00003p00222920 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.09 | OrthoFinder output from all 47 species | |
AMTR_s00016p00166520 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00022p00252600 | MEF1 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00029p00042600 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.11 | OrthoFinder output from all 47 species | |
AMTR_s00058p00187000 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33760... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00065p00033910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g49740... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00077p00166950 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
AT1G13410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G53600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G56570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT2G03880 | REME1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT2G13600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G27610 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G02010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
AT3G03580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G13880 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G14730 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.12 | OrthoFinder output from all 47 species | |
AT3G15930 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT4G02750 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
AT4G33170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.15 | OrthoFinder output from all 47 species | |
AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
AT5G06540 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT5G46460 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G52850 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
Ala_g38978 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g27882 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g27921 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g30099 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aop_g31135 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene04397.t1 | Aspi01Gene04397 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0113.g045915 | CRR22 | not classified & original description: CDS=197-1879 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0139.g051178 | No alias | not classified & original description: CDS=1-2667 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0158.g053860 | CRR2 | not classified & original description: CDS=1-978 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0658.g081282 | No alias | not classified & original description: CDS=13-2166 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g05714 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g19869 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g20133 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g29879 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g75809 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01000420001 | MEF22 | RNA processing.organelle machineries.RNA... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01002530001 | No alias | Pentatricopeptide repeat-containing protein At3g49710... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01003804001 | CRR22 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01004939001 | RARE1 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01007811001 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01007974001 | No alias | Pentatricopeptide repeat-containing protein At5g61400... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01008015001 | No alias | Pentatricopeptide repeat-containing protein At1g74600,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01008173001 | No alias | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.09 | OrthoFinder output from all 47 species | |
GSVIVT01008757001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01009407001 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009866001 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010125001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010654001 | No alias | Pentatricopeptide repeat-containing protein At4g38010... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01011501001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01011735001 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01011887001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012206001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.11 | OrthoFinder output from all 47 species | |
GSVIVT01012938001 | SLO1 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.11 | OrthoFinder output from all 47 species | |
GSVIVT01015087001 | CRR2 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01015466001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015468001 | No alias | Pentatricopeptide repeat-containing protein At1g31430... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01017378001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01017763001 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01018018001 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01018098001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01019231001 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01021023001 | No alias | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01021246001 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01021268001 | No alias | Pentatricopeptide repeat-containing protein At4g18840... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01021774001 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01022230001 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023644001 | No alias | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023860001 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01023971001 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024061001 | No alias | Pentatricopeptide repeat-containing protein At2g21090... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024912001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01024915001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01026141001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01027504001 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01027839001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01028022001 | No alias | Pentatricopeptide repeat-containing protein At3g62890... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01028154001 | No alias | Pentatricopeptide repeat-containing protein At2g35030,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01029347001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01029382001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01030248001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01031265001 | LPA66 | Pentatricopeptide repeat-containing protein At5g66520... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01031266001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.12 | OrthoFinder output from all 47 species | |
GSVIVT01032394001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033004001 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01033906001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01034655001 | No alias | Pentatricopeptide repeat-containing protein At5g04780,... | 0.11 | OrthoFinder output from all 47 species | |
GSVIVT01035618001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01036010001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01036142001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01036169001 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01036207001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01036788001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01036943001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01037332001 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.05 | OrthoFinder output from all 47 species | |
Gb_00194 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00201 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
Gb_00204 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00409 | No alias | RNA editing factor (SLO2) | 0.03 | OrthoFinder output from all 47 species | |
Gb_00683 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
Gb_03136 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04428 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04616 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05123 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
Gb_07638 | OTP84 | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
Gb_07756 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_08745 | CRR22 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
Gb_08863 | CRR22 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
Gb_10158 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_11667 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
Gb_15666 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Gb_16017 | CRR22 | RNA editing factor (MEF19) | 0.06 | OrthoFinder output from all 47 species | |
Gb_16515 | No alias | RNA editing factor (MEF11) | 0.03 | OrthoFinder output from all 47 species | |
Gb_16955 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_17734 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.14 | OrthoFinder output from all 47 species | |
Gb_18788 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
Gb_20266 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_20774 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_21055 | OTP84 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_21056 | CRR22 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
Gb_23671 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_26689 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
Gb_26696 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_28279 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_29028 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Gb_29557 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
Gb_29877 | CRR22 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
Gb_33117 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
Gb_35395 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
Gb_35645 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_36398 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
Gb_37176 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
Gb_37820 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_38068 | OTP86 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
Gb_41317 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g01115.1 | LOC_Os01g01115 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os01g40720.1 | LOC_Os01g40720 | RNA editing factor (MEF7) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g41650.1 | LOC_Os01g41650 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g68490.1 | MEF21, LOC_Os01g68490 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os03g13230.1 | LOC_Os03g13230 | Pentatricopeptide repeat-containing protein At4g37170... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g56850.1 | LOC_Os03g56850 | Pentatricopeptide repeat-containing protein At4g21300... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os03g60690.1 | LPA66, LOC_Os03g60690 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g63510.1 | LOC_Os03g63510 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os06g40860.1 | LOC_Os06g40860 | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g49185.1 | LOC_Os06g49185 | Pentatricopeptide repeat-containing protein At3g03580... | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os07g39910.1 | LOC_Os07g39910 | Pentatricopeptide repeat-containing protein At1g25360... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os07g47370.1 | LOC_Os07g47370 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os08g04400.1 | LOC_Os08g04400 | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g15800.1 | LOC_Os09g15800 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g24640.1 | REME1, LOC_Os09g24640 | Pentatricopeptide repeat-containing protein At2g36730... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os11g01836.1 | LOC_Os11g01836 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os11g29360.1 | OTP82, LOC_Os11g29360 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g37330.2 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os12g01850.1 | LOC_Os12g01850 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g06650.1 | LOC_Os12g06650 | Pentatricopeptide repeat-containing protein At4g15720... | 0.08 | OrthoFinder output from all 47 species | |
Lfl_g15164 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_6329g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
Msp_g43041 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g12671 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g22392 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0024.g009196 | No alias | not classified & original description: CDS=1-579 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0056.g014554 | No alias | not classified & original description: CDS=1-3528 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g26655 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g081560.2.1 | Solyc01g081560 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g095690.2.1 | Solyc01g095690 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g062610.2.1 | Solyc06g062610 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g006940.3.1 | Solyc11g006940 | component Sm-G of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g071370.1.1 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.05 | OrthoFinder output from all 47 species | |
Solyc12g096510.3.1 | Solyc12g096510 | Pentatricopeptide repeat-containing protein At5g66520... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e001200_P001 | Zm00001e001200 | Pentatricopeptide repeat-containing protein At5g59600... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e011748_P001 | LPA66, Zm00001e011748 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e023800_P003 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e035817_P001 | Zm00001e035817 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | HCCA |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | HCCA |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 97 | 124 |
IPR002885 | Pentatricopeptide_repeat | 575 | 599 |
IPR002885 | Pentatricopeptide_repeat | 198 | 228 |
IPR002885 | Pentatricopeptide_repeat | 170 | 194 |
IPR002885 | Pentatricopeptide_repeat | 500 | 547 |
IPR002885 | Pentatricopeptide_repeat | 399 | 444 |
IPR002885 | Pentatricopeptide_repeat | 297 | 344 |
No external refs found! |