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  5. Solyc02g088610.4.1

Solyc02g088610.4.1 (CLPB3, CLPB-P, APG6,...)


Aliases : CLPB3, CLPB-P, APG6, Solyc02g088610

Description : organellar chaperone (Clp-p|Clp-m)


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g088610.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00119290 ATHSP101, HOT1,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AT1G74310 ATHSP101, HOT1, HSP101 heat shock protein 101 0.09 OrthoFinder output from all 47 species
AT2G25140 CLPB4, CLPB-M, HSP98.7 casein lytic proteinase B4 0.08 OrthoFinder output from all 47 species
AT5G15450 CLPB3, CLPB-P, APG6 casein lytic proteinase B3 0.04 OrthoFinder output from all 47 species
Adi_g010878 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01489 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g28850 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Als_g38181 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49540 CLPB3, CLPB-P, APG6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15153 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11008 HSP93-V, DCA1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11015 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g12962 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13437 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22434 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41223.t1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Azfi_s0176.g056069 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g37964 CLPB3, CLPB-P, APG6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G013400.1 SAG15, CLPD,... chaperone component *(ClpD) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001416.4 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020996.22 CLPB4, CLPB-M, HSP98.7 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021365.4 ATHSP101, HOT1, HSP101 Chaperone protein ClpB1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021365.5 ATHSP101, HOT1, HSP101 Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cre11.g467644 ATHSP101, HOT1, HSP101 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Dac_g01014 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g05146 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g11203 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g14071 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g13807 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16548 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40536 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06117 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14780 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17103 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Dde_g23626 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29771 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01007880001 ATHSP101, HOT1, HSP101 External stimuli response.temperature.Hsp... 0.07 OrthoFinder output from all 47 species
GSVIVT01008635001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01008636001 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
GSVIVT01011496001 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.08 OrthoFinder output from all 47 species
GSVIVT01035900001 CLPB4, CLPB-M, HSP98.7 External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Gb_21271 ATHSP101, HOT1, HSP101 cytosolic chaperone (Hsp101) 0.01 OrthoFinder output from all 47 species
Gb_39383 ATHSP101, HOT1, HSP101 cytosolic chaperone (Hsp101) 0.03 OrthoFinder output from all 47 species
LOC_Os02g08490.1 CLPB4, CLPB-M,... organellar chaperone (Clp-p|Clp-m) 0.1 OrthoFinder output from all 47 species
LOC_Os03g31300.1 CLPB3, CLPB-P,... organellar chaperone (Clp-p|Clp-m) 0.09 OrthoFinder output from all 47 species
LOC_Os05g44340.1 ATHSP101, HOT1,... cytosolic chaperone (Hsp101) 0.12 OrthoFinder output from all 47 species
Lfl_g07411 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Lfl_g23098 HSP93-V, DCA1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_21130g0010 ATHSP101, HOT1, HSP101 Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp1g16450.1 ATHSP101, HOT1, HSP101 cytosolic chaperone (Hsp101) 0.04 OrthoFinder output from all 47 species
Mp3g09010.1 CLPB3, CLPB-P, APG6 organellar chaperone (Clp-p|Clp-m) 0.02 OrthoFinder output from all 47 species
Msp_g48913 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09665 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09666 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10561 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12640 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g29985 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Pir_g16869 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31360 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c19_4790V3.1 ATHSP101, HOT1,... heat shock protein 101 0.02 OrthoFinder output from all 47 species
Ppi_g10767 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52861 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009060 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16601 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Sam_g19448 No alias organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51825 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Smo170696 ATHSP101, HOT1, HSP101 External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Smo174539 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Smo411118 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Spa_g08654 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g17937 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18708 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18896 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g46726 ATHSP101, HOT1, HSP101 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g03515 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04164 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e002026_P002 CLPB3, CLPB-P,... organellar chaperone (Clp-p|Clp-m) 0.1 OrthoFinder output from all 47 species
Zm00001e013843_P002 CLPB4, CLPB-M,... organellar chaperone (Clp-p|Clp-m) 0.04 OrthoFinder output from all 47 species
Zm00001e032223_P001 ATHSP101, HOT1,... cytosolic chaperone (Hsp101) 0.08 OrthoFinder output from all 47 species
Zm00001e038056_P001 CLPB3, CLPB-P,... organellar chaperone (Clp-p|Clp-m) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 683 853
IPR019489 Clp_ATPase_C 860 939
IPR004176 Clp_R_dom 102 151
IPR004176 Clp_R_dom 177 228
IPR041546 ClpA/ClpB_AAA_lid 425 527
IPR003959 ATPase_AAA_core 286 418
No external refs found!