Solyc02g088480.3.1 (Solyc02g088480)


Aliases : Solyc02g088480

Description : no hits & (original description: none)


Gene families : OG0001399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001399_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g088480.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G69360 No alias Plant protein of unknown function (DUF863) 0.03 OrthoFinder output from all 47 species
Adi_g059426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G055600.1 Ceric.06G055600 not classified & original description: pacid=50620894... 0.02 OrthoFinder output from all 47 species
Ceric.21G057600.1 Ceric.21G057600 not classified & original description: pacid=50603888... 0.02 OrthoFinder output from all 47 species
Dac_g12935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007938001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g55130.2 LOC_Os03g55130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g41600.2 LOC_Os11g41600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g38870.2 LOC_Os12g38870 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_52062g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g18633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018317_P001 Zm00001e018317 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR008581 DUF863_pln 418 933
No external refs found!