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  5. Solyc02g088300.3.1

Solyc02g088300.3.1 (HYP1, ATHYP1, Solyc02g088300)


Aliases : HYP1, ATHYP1, Solyc02g088300

Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g088300.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00059520 HYP1, ATHYP1,... Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
Ala_g16435 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G055700.1 Ceric.16G055700 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g09013 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30494 ERD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 188 343
IPR032880 Csc1/OSCA1-like_N 6 167
IPR003864 CSC1/OSCA1-like_7TM 356 621
No external refs found!