Solyc02g087377.1.1 (SNL2, Solyc02g087377)

Aliases : SNL2, Solyc02g087377

Description : Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana (sp|o48686|snl3_arath : 183.0)

Gene families : OG0000547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g087377.1.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G27260	No alias	Paired amphipathic helix (PAH2) superfamily protein	0.03	OrthoFinder output from all 47 species
AT1G70030	No alias	Paired amphipathic helix (PAH2) superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G35610	No alias	Paired amphipathic helix (PAH2) superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g103365	SNL4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10332683g0010	SNL4	Paired amphipathic helix protein Sin3-like 3...	0.04	OrthoFinder output from all 47 species
Pir_g44415	SNL2	component *(SNL) of histone deacetylase machineries &...	0.02	OrthoFinder output from all 47 species
Pir_g48141	SNL4	component *(SNL) of histone deacetylase machineries &...	0.03	OrthoFinder output from all 47 species
Zm00001e025646_P001	Zm00001e025646	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
MF	GO:0008146	sulfotransferase activity	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
BP	GO:0019566	arabinose metabolic process	IEP	HCCA
BP	GO:0046373	L-arabinose metabolic process	IEP	HCCA
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003822	PAH	164	207
IPR003822	PAH	83	126
IPR003822	PAH	259	301
IPR003822	PAH	330	371
IPR003822	PAH	493	536

External Links

No external refs found!