1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g087350.3.1

Solyc02g087350.3.1 (GATL10, Solyc02g087350)


Aliases : GATL10, Solyc02g087350

Description : galacturonosyltransferase


Gene families : OG0000478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g087350.3.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00258170 GATL3,... Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.12 OrthoFinder output from all 47 species
AMTR_s00025p00136940 GATL4,... Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
AT1G24170 GATL8, LGT9 Nucleotide-diphospho-sugar transferases superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G28340 GATL10 galacturonosyltransferase-like 10 0.08 OrthoFinder output from all 47 species
Adi_g011441 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03280 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12629 GATL3 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31450 GATL3 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05607 GATL4 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g17042 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14506 GATL7 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene22096.t1 GATL7, Aspi01Gene22096 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35145.t1 GATL7, Aspi01Gene35145 galacturonosyltransferase & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g14305 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G079200.1 GATL7, Ceric.06G079200 galacturonosyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G001800.1 GATL3, Ceric.14G001800 galacturonosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G074700.1 GATL10, Ceric.20G074700 galacturonosyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.28G053200.1 GATL3, Ceric.28G053200 galacturonosyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g12360 GATL7 galacturonosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g22076 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32660 GATL5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36573 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47476 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05810 GATL3 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09040 GATL3 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01009639001 No alias Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
GSVIVT01032581001 GATL8, LGT9 Probable galacturonosyltransferase-like 8 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
Gb_30431 GATL3 galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
Gb_37205 GATL7 galacturonosyltransferase 0.07 OrthoFinder output from all 47 species
LOC_Os02g50600.1 GATL9, LGT8,... galacturonosyltransferase 0.13 OrthoFinder output from all 47 species
LOC_Os03g18890.1 GATL7, LOC_Os03g18890 galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
LOC_Os03g47530.1 GLZ1, GATL1,... galacturonosyltransferase 0.06 OrthoFinder output from all 47 species
LOC_Os04g44850.1 GATL3, LOC_Os04g44850 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Len_g10093 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19113 GATL7 galacturonosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g07259 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15956 GATL3 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432403g0010 GATL7 galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
MA_130934g0010 GATL4 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Mp2g19350.1 GATL7 galacturonosyltransferase 0.06 OrthoFinder output from all 47 species
Msp_g47447 GATL7 galacturonosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g25286 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g31598 LGT10, GATL6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40150 GATL3 galacturonosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g44954 GATL7 galacturonosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g44955 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18339 GATL3 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24913 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60730 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022657 LGT10, GATL6 galacturonosyltransferase & original description: CDS=1-1368 0.03 OrthoFinder output from all 47 species
Solyc06g008910.2.1 GATL4, Solyc06g008910 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Spa_g06350 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10107 GATL7 galacturonosyltransferase & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g21492 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05474 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21037 GATL7 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001733_P001 GATL4, Zm00001e001733 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e005155_P001 GLZ1, GATL1,... galacturonosyltransferase 0.09 OrthoFinder output from all 47 species
Zm00001e007430_P001 GATL3, Zm00001e007430 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e015772_P001 GATL9, LGT8,... galacturonosyltransferase 0.11 OrthoFinder output from all 47 species
Zm00001e036043_P001 GATL9, LGT8,... galacturonosyltransferase 0.09 OrthoFinder output from all 47 species
Zm00001e038370_P001 GATL7, Zm00001e038370 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 72 330
No external refs found!