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  5. Solyc02g086930.4.1

Solyc02g086930.4.1 (ATHB1, ATHB-1, HAT5,...)


Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1, Solyc02g086930

Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g086930.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00235500 HB51, ATHB51,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.04 OrthoFinder output from all 47 species
AT5G03790 HB51, ATHB51, LMI1 homeobox 51 0.03 OrthoFinder output from all 47 species
Aev_g10709 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g11444 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g13559 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene58187.t1 Aspi01Gene58187 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17323 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02341 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
GSVIVT01020033001 ATHB13 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01027407001 HB-7, ATHB-7, ATHB7 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Gb_07209 ATHB3, HB-3, ATHB-3, HAT7 Homeobox-leucine zipper protein HAT7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g07450.1 ATHB13, LOC_Os03g07450 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os08g32080.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os08g32085.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os09g21180.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os09g29460.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_10428916g0010 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Nbi_g13843 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g21633 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g41934 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g41475 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc02g067410.2.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Tin_g09467 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g19598 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g44726 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004824_P001 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Zm00001e010218_P001 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e015717_P003 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Zm00001e022379_P002 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 66 119
IPR003106 Leu_zip_homeo 121 163
No external refs found!