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  5. Solyc02g086530.4.1

Solyc02g086530.4.1 (SIP1, Solyc02g086530)


Aliases : SIP1, Solyc02g086530

Description : raffinose synthase


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g086530.4.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00092110 AtSTS, STS,... Carbohydrate metabolism.raffinose family oligosaccharide... 0.04 OrthoFinder output from all 47 species
Aev_g19198 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38472 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12692 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07183 AtSTS, STS stachyose synthase 0.04 OrthoFinder output from all 47 species
Msp_g16033 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11789 SIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24999 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023485 SIP2, AtSIP2 not classified & original description: CDS=1-2646 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 22 758
No external refs found!