Solyc02g085580.4.1 (Solyc02g085580)


Aliases : Solyc02g085580

Description : C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g085580.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G66730 No alias C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
Adi_g057739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099246 NUC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08312 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene63551.t1 MGP, Aspi01Gene63551 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01003119001 AtIDD12, IDD12 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_17209 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os01g39110.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os01g70870.1 IDD2, AtIDD2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g45054.1 AtIDD12, IDD12,... C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
LOC_Os03g10140.1 LOC_Os03g10140 C2H2 zinc finger transcription factor. elicitor peptide... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39310.1 MGP, LOC_Os07g39310 C2H2 zinc finger transcription factor 0.08 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Pnu_g22200 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g28092 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016076 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 22 44
No external refs found!