Aliases : WUS, PGA6, WUS1, Solyc02g083950
Description : transcription factor (WOX)
Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00149750 | WOX2,... | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00021p00189010 | STIP, HB-3,... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00023p00181320 | WOX3, PRS1, PRS,... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00405p00009920 | WUS, PGA6, WUS1,... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g077524 | STPL, WOX8 | WOX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g24358 | STPL, WOX8 | WOX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011738001 | WOX1 | RNA biosynthesis.transcriptional activation.HB... | 0.1 | OrthoFinder output from all 47 species | |
GSVIVT01016360001 | WOX5 | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018787001 | WUS, PGA6, WUS1 | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01021144001 | STIP, HB-3, WOX9 | RNA biosynthesis.transcriptional activation.HB... | 0.11 | OrthoFinder output from all 47 species | |
Gb_12294 | No alias | transcription factor (WOX) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g02730.1 | WOX3, PRS1, PRS,... | transcription factor (WOX) | 0.02 | OrthoFinder output from all 47 species | |
MA_10344604g0010 | STIP, HB-3, WOX9 | transcription factor (WOX) | 0.02 | OrthoFinder output from all 47 species | |
MA_8832398g0010 | WOX2 | transcription factor (WOX) | 0.02 | OrthoFinder output from all 47 species | |
MA_9427942g0010 | WOX3, PRS1, PRS | transcription factor (WOX) | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g075567.1.1 | WOX3, PRS1, PRS,... | transcription factor (WOX) | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g072790.2.1 | WOX3, PRS1, PRS,... | transcription factor (WOX) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e024170_P001 | Zm00001e024170 | WUSCHEL-related homeobox 3B OS=Zea mays... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001356 | Homeobox_dom | 26 | 86 |
No external refs found! |