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  5. Solyc02g083870.3.1

Solyc02g083870.3.1 (Solyc02g083870)


Aliases : Solyc02g083870

Description : GASA precursor polypeptide


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g083870.3.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00230770 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AT1G74670 No alias Gibberellin-regulated family protein 0.04 OrthoFinder output from all 47 species
AT5G15230 GASA4 GAST1 protein homolog 4 0.05 OrthoFinder output from all 47 species
Aev_g00312 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g36519 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39883 GASA2 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43057 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34519 GASA1 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03355 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12349.t1 Aspi01Gene12349 GASA precursor polypeptide & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene33463.t1 Aspi01Gene33463 GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53352.t1 Aspi01Gene53352 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03520 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07912 GASA3 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G072800.1 Ceric.04G072800 GASA precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G011000.1 Ceric.07G011000 GASA precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.07G011200.1 GASA3, Ceric.07G011200 GASA precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g12277 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21845 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g29758 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41660 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g14897 No alias GASA precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g27816 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g28012 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003388001 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
GSVIVT01011412001 GASA4 Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
GSVIVT01034476001 No alias Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
Gb_04075 No alias GASA precursor polypeptide 0.05 OrthoFinder output from all 47 species
Gb_12909 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Gb_24074 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
LOC_Os06g15620.1 LOC_Os06g15620 GASA precursor polypeptide 0.07 OrthoFinder output from all 47 species
Len_g45849 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Len_g46952 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
MA_132217g0010 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_24001g0010 No alias GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
MA_25298g0010 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
MA_444615g0010 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_7575249g0010 No alias GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Msp_g08513 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08529 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12939 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24203 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27903 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56045 GASA3 GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g20309 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g24863 No alias GASA precursor polypeptide & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g61575 GASA3 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015335 No alias GASA precursor polypeptide & original description: CDS=1460-1924 0.03 OrthoFinder output from all 47 species
Smo417581 GASA4 Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
Solyc02g089350.3.1 Solyc02g089350 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc08g005620.3.1 Solyc08g005620 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc11g011210.2.1 GASA5, Solyc11g011210 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Tin_g13744 GASA3 GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g38213 No alias GASA precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e042254_P001 Zm00001e042254 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 43 102
No external refs found!