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  5. Solyc02g083310.3.1

Solyc02g083310.3.1 (Solyc02g083310)


Aliases : Solyc02g083310

Description : Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica (sp|q6yzm6|bbd2_orysj : 120.0)


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc02g083310.3.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G19660 No alias Wound-responsive family protein 0.03 OrthoFinder output from all 47 species
Cba_g33866 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24289 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009760001 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp1g11770.1 BBD1, ATBBD1 Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g15233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 139 253
No external refs found!