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  5. Solyc02g082450.3.1

Solyc02g082450.3.1 (Solyc02g082450)


Aliases : Solyc02g082450

Description : auxin efflux transporter (PILS). auxin transporter (PILS)


Gene families : OG0000887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g082450.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G76530 No alias Auxin efflux carrier family protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene65480.t1 Aspi01Gene65480 auxin transporter *(PILS) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012357001 No alias Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
GSVIVT01026429001 No alias Solute transport.carrier-mediated transport.BART... 0.08 OrthoFinder output from all 47 species
Gb_20670 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.06 OrthoFinder output from all 47 species
Gb_31809 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.02 OrthoFinder output from all 47 species
LOC_Os09g38130.1 LOC_Os09g38130 auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species
MA_21662g0010 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species
Ppi_g16977 No alias auxin transporter *(PILS) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005222 No alias auxin transporter *(PILS) & original description: CDS=1-1227 0.03 OrthoFinder output from all 47 species
Spa_g39816 No alias auxin transporter *(PILS) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e019462_P001 Zm00001e019462 auxin efflux transporter (PILS). auxin transporter (PILS) 0.02 OrthoFinder output from all 47 species
Zm00001e022932_P001 Zm00001e022932 auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species
Zm00001e034546_P001 Zm00001e034546 auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 396
No external refs found!