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  5. Solyc02g082280.3.1

Solyc02g082280.3.1 (Solyc02g082280)


Aliases : Solyc02g082280

Description : component TRAPPC11 of TRAPP complex


Gene families : OG0005459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g082280.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G65950 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.08 OrthoFinder output from all 47 species
Adi_g021913 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Aev_g29595 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g15655 No alias component *(TRAPPC11) of TRAPP complex & original... 0.04 OrthoFinder output from all 47 species
Als_g27446 No alias component *(TRAPPC11) of TRAPP complex & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene63999.t1 Aspi01Gene63999 component *(TRAPPC11) of TRAPP complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0199.g057456 No alias component *(TRAPPC11) of TRAPP complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G020700.1 Ceric.20G020700 component *(TRAPPC11) of TRAPP complex & original... 0.04 OrthoFinder output from all 47 species
Cre17.g729700 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g04141 No alias component *(TRAPPC11) of TRAPP complex & original... 0.07 OrthoFinder output from all 47 species
LOC_Os02g48380.1 LOC_Os02g48380 component TRAPPC11 of TRAPP complex 0.13 OrthoFinder output from all 47 species
Len_g23253 No alias component *(TRAPPC11) of TRAPP complex & original... 0.02 OrthoFinder output from all 47 species
Lfl_g38812 No alias component *(TRAPPC11) of TRAPP complex & original... 0.1 OrthoFinder output from all 47 species
MA_10430649g0010 No alias component TRAPPC11 of TRAPP complex 0.06 OrthoFinder output from all 47 species
Mp8g00140.1 No alias component TRAPPC11 of TRAPP complex 0.11 OrthoFinder output from all 47 species
Msp_g14053 No alias component *(TRAPPC11) of TRAPP complex & original... 0.06 OrthoFinder output from all 47 species
Ore_g19718 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Smo100366 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.04 OrthoFinder output from all 47 species
Spa_g16852 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e015639_P001 Zm00001e015639 component TRAPPC11 of TRAPP complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR021773 TPC11 254 521
IPR025876 TRAPPC11_C 1090 1132
No external refs found!