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  5. Solyc02g081780.3.1

Solyc02g081780.3.1 (Solyc02g081780)


Aliases : Solyc02g081780

Description : no hits & (original description: none)


Gene families : OG0004345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g081780.3.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00193040 evm_27.TU.AmTr_v1... B3 domain-containing protein Os11g0197600 OS=Oryza... 0.02 OrthoFinder output from all 47 species
AT1G49475 No alias AP2/B3-like transcriptional factor family protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g42420.1 LOC_Os03g42420 transcription factor (REM) 0.02 OrthoFinder output from all 47 species
LOC_Os03g42430.1 LOC_Os03g42430 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
LOC_Os08g23570.1 LOC_Os08g23570 Putative B3 domain-containing protein Os08g0325100... 0.03 OrthoFinder output from all 47 species
LOC_Os12g40120.1 LOC_Os12g40120 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Solyc00g011660.1.1 Solyc00g011660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc00g500092.1.1 Solyc00g500092 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc00g500097.1.1 Solyc00g500097 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc00g500219.1.1 Solyc00g500219 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc00g500221.1.1 Solyc00g500221 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc01g079560.3.1 Solyc01g079560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g065340.3.1 Solyc02g065340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g090170.3.1 Solyc02g090170 transcription factor (REM) 0.06 OrthoFinder output from all 47 species
Solyc03g036477.2.1 Solyc03g036477 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g043580.3.1 Solyc03g043580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 25 97
IPR003340 B3_DNA-bd 203 275
No external refs found!