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  5. Solyc02g081670.1.1

Solyc02g081670.1.1 (UFO, Solyc02g081670)


Aliases : UFO, Solyc02g081670

Description : component UFO of SCF E3 ubiquitin ligase complex


Gene families : OG0002287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g081670.1.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT1G30950 UFO F-box family protein 0.03 OrthoFinder output from all 47 species
Aob_g30684 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g04705 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dac_g07944 No alias substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g14589 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os06g45460.1 UFO, LOC_Os06g45460 component UFO of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
MA_12325g0010 UFO component UFO of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
MA_123918g0010 UFO component UFO of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Pir_g60554 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g14694 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e037737_P001 UFO, Zm00001e037737 component UFO of SCF E3 ubiquitin ligase complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 48 83
No external refs found!