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Aliases : Solyc02g080840
Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana (sp|o65451|fb333_arath : 319.0)
Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00037390 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00128270 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00128640 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00067p00091510 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT4G04480 | No alias | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... | 0.04 | OrthoFinder output from all 47 species | |
| AT4G22030 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g16127 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g15216 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene20983.t1 | Aspi01Gene20983 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34558.t1 | Aspi01Gene34558 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0182.g056424 | No alias | not classified & original description: CDS=1-1896 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0334.g065497 | No alias | not classified & original description: CDS=1-1488 | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.1Z099600.1 | Ceric.1Z099600 | not classified & original description: pacid=50573463... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z099700.1 | Ceric.1Z099700 | not classified & original description: pacid=50573460... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z099800.1 | Ceric.1Z099800 | not classified & original description: pacid=50573466... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z159800.1 | Ceric.1Z159800 | not classified & original description: pacid=50567680... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z159900.1 | Ceric.1Z159900 | not classified & original description: pacid=50567683... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z166800.1 | Ceric.1Z166800 | not classified & original description: pacid=50632888... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z179600.1 | Ceric.1Z179600 | not classified & original description: pacid=50596894... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z179700.1 | Ceric.1Z179700 | not classified & original description: pacid=50596893... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z228600.1 | Ceric.1Z228600 | not classified & original description: pacid=50606299... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G013700.1 | Ceric.33G013700 | not classified & original description: pacid=50607125... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g32097 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g20132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17786 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g17787 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19663 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g29424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012691001 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| Gb_15744 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15745 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15746 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g13190.1 | LOC_Os02g13190 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g13260.1 | LOC_Os02g13260 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g28590.1 | LOC_Os02g28590 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g01970.1 | LOC_Os12g01970 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g00910.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g00930.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g12175 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g35722 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09104 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36415 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g080850.1.1 | Solyc02g080850 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0061134 | peptidase regulator activity | IEP | HCCA |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027949 | Chloroplast_duf | 81 | 395 |
| No external refs found! |