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  5. Solyc02g078840.4.1

Solyc02g078840.4.1 (Solyc02g078840)


Aliases : Solyc02g078840

Description : Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana (sp|q9m5p2|scam3_arath : 371.0)


Gene families : OG0001155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g078840.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G32050 No alias SCAMP family protein 0.03 OrthoFinder output from all 47 species
Cre02.g089900 No alias Secretory carrier-associated membrane protein 5 OS=Oryza... 0.04 OrthoFinder output from all 47 species
GSVIVT01005834001 SC3 Secretory carrier-associated membrane protein OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
Nbi_g05251 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.02 OrthoFinder output from all 47 species
Sam_g18427 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.02 OrthoFinder output from all 47 species
Sam_g19074 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.02 OrthoFinder output from all 47 species
Solyc10g008550.3.1 Solyc10g008550 Secretory carrier-associated membrane protein 2 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e015529_P002 Zm00001e015529 Secretory carrier-associated membrane protein 6 OS=Oryza... 0.05 OrthoFinder output from all 47 species
Zm00001e019630_P002 Zm00001e019630 Secretory carrier-associated membrane protein 2 OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
InterPro domains Description Start Stop
IPR007273 SCAMP 118 289
No external refs found!