Solyc02g071180.3.1 (Solyc02g071180)


Aliases : Solyc02g071180

Description : no hits & (original description: none)


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g071180.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00072820 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G29370 No alias Kinase-related protein of unknown function (DUF1296) 0.05 OrthoFinder output from all 47 species
Adi_g008163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g025128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g053981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g061004 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g074702 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g120900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g129391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g129392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04421.t2 Aspi01Gene04421 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007708 No alias not classified & original description: CDS=120-2903 0.05 OrthoFinder output from all 47 species
Azfi_s0102.g044541 No alias not classified & original description: CDS=280-3048 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g26977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.05 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.04 OrthoFinder output from all 47 species
Dac_g07091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21669 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g15160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19941 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01030121001 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_00263 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os01g47430.1 LOC_Os01g47430 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g11160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15622 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_113167g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_60376g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g39958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024848 No alias not classified & original description: CDS=93-2615 0.05 OrthoFinder output from all 47 species
Sam_g10558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438753 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g045230.4.1 Solyc07g045230 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g08817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020237_P001 Zm00001e020237 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e022213_P003 Zm00001e022213 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028004_P001 Zm00001e028004 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 14 72
No external refs found!