Aliases : Solyc02g068480
Description : protein factor (USP39) of U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP)
Gene families : OG0005722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005722_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g105601 | No alias | component *(USP39) of U4/U6.U5 tri-snRNP complex &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g09374 | No alias | component *(USP39) of U4/U6.U5 tri-snRNP complex &... | 0.02 | OrthoFinder output from all 47 species | |
Cre17.g721600 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g00812 | No alias | component *(USP39) of U4/U6.U5 tri-snRNP complex &... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g24250.1 | LOC_Os09g24250 | protein factor (USP39) of U4/U6 U5 small nuclear... | 0.06 | OrthoFinder output from all 47 species | |
Ore_g16909 | No alias | component *(USP39) of U4/U6.U5 tri-snRNP complex &... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
BP | GO:0016579 | protein deubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
MF | GO:0008192 | RNA guanylyltransferase activity | IEP | HCCA |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016311 | dephosphorylation | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
BP | GO:0036260 | RNA capping | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0070568 | guanylyltransferase activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No external refs found! |