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  5. Solyc02g067630.3.1

Solyc02g067630.3.1 (Solyc02g067630)


Aliases : Solyc02g067630

Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 483.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 243.4)


Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067630.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00031370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00135670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s04606p00004600 evm_27.TU.AmTr_v1... Polygalacturonase OS=Prunus persica 0.02 OrthoFinder output from all 47 species
AT1G05650 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G05660 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G65570 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43880 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G43890 No alias Pectin lyase-like superfamily protein 0.06 OrthoFinder output from all 47 species
GSVIVT01004007001 No alias Polygalacturonase OS=Prunus persica 0.05 OrthoFinder output from all 47 species
GSVIVT01038243001 No alias Polygalacturonase OS=Prunus persica 0.05 OrthoFinder output from all 47 species
LOC_Os01g43490.1 LOC_Os01g43490 Polygalacturonase OS=Prunus persica... 0.06 OrthoFinder output from all 47 species
LOC_Os11g14410.1 LOC_Os11g14410 Polygalacturonase OS=Prunus persica... 0.06 OrthoFinder output from all 47 species
Solyc08g014540.1.1 Solyc08g014540 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Solyc12g019130.3.1 Solyc12g019130 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Solyc12g019180.2.1 Solyc12g019180 Polygalacturonase OS=Prunus persica... 0.06 OrthoFinder output from all 47 species
Solyc12g019220.1.1 Solyc12g019220 Polygalacturonase OS=Prunus persica... 0.08 OrthoFinder output from all 47 species
Zm00001e019002_P001 Zm00001e019002 Polygalacturonase OS=Prunus persica... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 50 376
No external refs found!