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  5. Solyc02g066905.1.1

Solyc02g066905.1.1 (AFP2, Solyc02g066905)


Aliases : AFP2, Solyc02g066905

Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g066905.1.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008104001 AFP3 RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68820.1 LOC_Os01g68820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g41160.1 AFP3, LOC_Os07g41160 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Len_g48957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g033020.1.1 Solyc02g033020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 79 115
No external refs found!