1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g064945.1.1

Solyc02g064945.1.1 (Solyc02g064945)


Aliases : Solyc02g064945

Description : Protein IRX15-LIKE OS=Arabidopsis thaliana (sp|q9fh92|ix15l_arath : 393.0)


Gene families : OG0001631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001631_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g064945.1.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00012720 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.09 OrthoFinder output from all 47 species
AT1G09610 No alias Protein of unknown function (DUF579) 0.24 OrthoFinder output from all 47 species
AT1G27930 No alias Protein of unknown function (DUF579) 0.03 OrthoFinder output from all 47 species
AT1G33800 No alias Protein of unknown function (DUF579) 0.03 OrthoFinder output from all 47 species
AT1G67330 No alias Protein of unknown function (DUF579) 0.05 OrthoFinder output from all 47 species
AT1G71690 No alias Protein of unknown function (DUF579) 0.04 OrthoFinder output from all 47 species
AT2G15440 No alias Protein of unknown function (DUF579) 0.03 OrthoFinder output from all 47 species
AT3G50220 No alias Protein of unknown function (DUF579) 0.21 OrthoFinder output from all 47 species
AT4G09990 No alias Protein of unknown function (DUF579) 0.04 OrthoFinder output from all 47 species
AT5G67210 No alias Protein of unknown function (DUF579) 0.22 OrthoFinder output from all 47 species
Adi_g009283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33374 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05404 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14287 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene65837.t1 Aspi01Gene65837 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65839.t1 Aspi01Gene65839 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65841.t1 Aspi01Gene65841 glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0170.g055595 No alias not classified & original description: CDS=1-903 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062300 No alias not classified & original description: CDS=1-879 0.03 OrthoFinder output from all 47 species
Ceric.14G023000.1 Ceric.14G023000 not classified & original description: pacid=50634052... 0.08 OrthoFinder output from all 47 species
Ceric.38G045400.1 Ceric.38G045400 not classified & original description: pacid=50579776... 0.05 OrthoFinder output from all 47 species
Dac_g00741 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g02681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43175 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g15361 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004862001 No alias Cell wall.hemicellulose.xylan.modification and... 0.14 OrthoFinder output from all 47 species
GSVIVT01023221001 No alias Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana 0.19 OrthoFinder output from all 47 species
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.08 OrthoFinder output from all 47 species
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.07 OrthoFinder output from all 47 species
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os02g06380.1 LOC_Os02g06380 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
LOC_Os04g55640.1 LOC_Os04g55640 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os06g47310.1 LOC_Os06g47310 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g13870.1 LOC_Os11g13870 Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g30914 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g35377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.08 OrthoFinder output from all 47 species
MA_19210g0010 No alias glucuronoxylan 4-O-methyltransferase 0.05 OrthoFinder output from all 47 species
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_58340g0010 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Msp_g12991 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00402 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27137 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29128 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g18981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g01166 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_5380V3.1 Pp3c16_5380 Protein of unknown function (DUF579) 0.02 OrthoFinder output from all 47 species
Ppi_g14749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019581 No alias not classified & original description: CDS=1-867 0.03 OrthoFinder output from all 47 species
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Solyc05g015497.1.1 Solyc05g015497 Probable methyltransferase At1g27930 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc11g031950.1.1 Solyc11g031950 glucuronoxylan 4-O-methyltransferase 0.08 OrthoFinder output from all 47 species
Spa_g05421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24624 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g30525 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g56708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011047_P001 Zm00001e011047 Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.15 OrthoFinder output from all 47 species
Zm00001e013688_P001 Zm00001e013688 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Zm00001e039770_P002 Zm00001e039770 glucuronoxylan 4-O-methyltransferase 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 95 283
No external refs found!