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  5. Solyc02g062400.3.1

Solyc02g062400.3.1 (SRS1, STY1, Solyc02g062400)


Aliases : SRS1, STY1, Solyc02g062400

Description : transcription factor (SRS)


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g062400.3.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00141180 LRP1,... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00161200 LRP1,... RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
AT1G19790 SRS7 SHI-related sequence 7 0.04 OrthoFinder output from all 47 species
Adi_g058362 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035783 SHI SRS-type transcription factor & original description: CDS=1-2148 0.03 OrthoFinder output from all 47 species
Ceric.02G095600.1 SHI, Ceric.02G095600 SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G028100.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g13643 LRP1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40676 SHI SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30563 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47477 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02264 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
GSVIVT01024206001 SHI RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
LOC_Os05g32070.1 LRP1, LOC_Os05g32070 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Lfl_g18740 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25627 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_2299g0010 LRP1 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Pir_g48067 LRP1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007215 SHI SRS-type transcription factor & original description: CDS=1-2160 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968 SHI SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023316 SRS1, STY1 not classified & original description: CDS=12-590 0.03 OrthoFinder output from all 47 species
Solyc10g054070.1.1 SRS5, Solyc10g054070 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Spa_g50442 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29778 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30774 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024681_P001 SHI, Zm00001e024681 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!