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  5. Solyc02g036360.1.1

Solyc02g036360.1.1 (Phox2, Solyc02g036360)


Aliases : Phox2, Solyc02g036360

Description : myosin adaptor protein (MadB)


Gene families : OG0001349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g036360.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00213700 Phox2,... Cytoskeleton.microfilament network.myosin... 0.06 OrthoFinder output from all 47 species
Adi_g057533 Phox2 myosin adaptor protein *(MadB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10839 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06376 Phox2 myosin adaptor protein *(MadB) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02282 Phox2 myosin adaptor protein *(MadB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09734 Phox2 myosin adaptor protein *(MadB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13258 Phox2 myosin adaptor protein *(MadB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G034700.1 Phox2, Ceric.28G034700 myosin adaptor protein *(MadB) & original description:... 0.05 OrthoFinder output from all 47 species
Cre10.g430501 Phox2 Cytoskeleton.microfilament network.myosin... 0.02 OrthoFinder output from all 47 species
Dcu_g04075 Phox2 myosin adaptor protein *(MadB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11617 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g20020.2 Phox1, LOC_Os08g20020 myosin adaptor protein (MadB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g04990.1 Phox2, LOC_Os09g04990 myosin adaptor protein (MadB) 0.04 OrthoFinder output from all 47 species
Lfl_g06238 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18363 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46380 Phox2 myosin adaptor protein *(MadB) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006804 Phox2 myosin adaptor protein *(MadB) & original description: CDS=1-2523 0.03 OrthoFinder output from all 47 species
Spa_g16944 Phox2 myosin adaptor protein *(MadB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18041 Phox2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017000_P001 Phox2, Zm00001e017000 myosin adaptor protein (MadB) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 283 374
No external refs found!