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  5. Solyc02g036260.4.1

Solyc02g036260.4.1 (Solyc02g036260)


Aliases : Solyc02g036260

Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g036260.4.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00143150 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.06 OrthoFinder output from all 47 species
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.03 OrthoFinder output from all 47 species
Ala_g09676 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04408 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08428 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63971.t1 ERD4, Aspi01Gene63971 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27537 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21426 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19010 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_08555 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Gb_08556 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Gb_08557 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Gb_24188 No alias calcium-permeable channel (OSCA) 0.05 OrthoFinder output from all 47 species
Len_g15514 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.08 OrthoFinder output from all 47 species
Len_g28172 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431698g0010 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
MA_10551g0010 No alias Protein OSCA1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_15650g0010 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
MA_630721g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g20112 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012117_P001 RXW8, Zm00001e012117 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 116 277
IPR003864 CSC1/OSCA1-like_7TM 288 560
IPR032880 Csc1/OSCA1-like_N 1 95
No external refs found!