Aliases : Solyc02g031960
Description : no hits & (original description: none)
Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
AT1G14420 | AT59 | Pectate lyase family protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G02720 | No alias | Pectate lyase family protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G01270 | No alias | Pectate lyase family protein | 0.03 | OrthoFinder output from all 47 species | |
Aop_g65574 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01020067001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01020068001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01024239001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g12300.1 | AT59, LOC_Os02g12300 | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os06g05260.1 | LOC_Os06g05260 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g38510.2 | LOC_Os06g38510 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
Len_g40234 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g26215 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g007080.4.1 | AT59, Solyc05g007080 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g061890.3.1 | Solyc09g061890 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024959_P001 | AT59, Zm00001e024959 | pectate lyase | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030570 | pectate lyase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006020 | inositol metabolic process | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
BP | GO:0019310 | inositol catabolic process | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
MF | GO:0050113 | inositol oxygenase activity | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007524 | Pec_lyase_N | 29 | 79 |
No external refs found! |