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  5. Solyc02g014543.1.1

Solyc02g014543.1.1 (Solyc02g014543)


Aliases : Solyc02g014543

Description : no hits & (original description: none)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g014543.1.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Solyc02g038723.1.1 CRK8, Solyc02g038723 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Solyc07g009477.1.1 CRK8, Solyc07g009477 Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Solyc10g038045.1.1 CRK8, Solyc10g038045 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species
Solyc10g051255.1.1 CRK8, Solyc10g051255 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc11g027895.1.1 CRK8, Solyc11g027895 Uncharacterized mitochondrial protein AtMg00810... 0.03 OrthoFinder output from all 47 species
Solyc12g013935.1.1 CRK8, Solyc12g013935 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc12g042855.1.1 CRK8, Solyc12g042855 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species
Solyc12g062203.1.1 CRK8, Solyc12g062203 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!