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  5. Solyc02g014490.4.1

Solyc02g014490.4.1 (SVL4, Solyc02g014490)


Aliases : SVL4, Solyc02g014490

Description : Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana (sp|q9lvn0|gpdl7_arath : 575.0)


Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g014490.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00252p00015420 SVL4,... Glycerophosphodiester phosphodiesterase GDPDL6... 0.17 OrthoFinder output from all 47 species
AT4G26690 GPDL2, SHV3, MRH5 PLC-like phosphodiesterase family protein 0.06 OrthoFinder output from all 47 species
AT5G55480 SVL1 SHV3-like 1 0.03 OrthoFinder output from all 47 species
AT5G58050 SVL4 SHV3-like 4 0.17 OrthoFinder output from all 47 species
AT5G58170 SVL5 SHV3-like 5 0.14 OrthoFinder output from all 47 species
Aop_g08832 SVL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G056600.1 SVL5, Ceric.08G056600 not classified & original description: pacid=50637619... 0.02 OrthoFinder output from all 47 species
Ceric.17G055800.1 SVL5, Ceric.17G055800 not classified & original description: pacid=50617674... 0.03 OrthoFinder output from all 47 species
GSVIVT01003731001 SVL5 Glycerophosphodiester phosphodiesterase GDPDL6... 0.15 OrthoFinder output from all 47 species
Gb_10598 SVL1 Glycerophosphodiester phosphodiesterase GDPDL4... 0.04 OrthoFinder output from all 47 species
Gb_18319 SVL1 Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09450.1 SVL5, LOC_Os02g09450 Glycerophosphodiester phosphodiesterase GDPDL7... 0.11 OrthoFinder output from all 47 species
LOC_Os04g39610.1 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 OrthoFinder output from all 47 species
Lfl_g20356 SVL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434415g0020 SNC4 Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4... 0.03 OrthoFinder output from all 47 species
Mp8g07940.1 SVL5 Glycerophosphodiester phosphodiesterase GDPDL7... 0.04 OrthoFinder output from all 47 species
Ppi_g05893 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g065120.3.1 SVL1, Solyc07g065120 Glycerophosphodiester phosphodiesterase GDPDL4... 0.05 OrthoFinder output from all 47 species
Spa_g21490 SVL5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40260 SVL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014970_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.03 OrthoFinder output from all 47 species
Zm00001e025069_P001 SVL5, Zm00001e025069 Glycerophosphodiester phosphodiesterase GDPDL7... 0.13 OrthoFinder output from all 47 species
Zm00001e041063_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 353 640
IPR030395 GP_PDE_dom 65 325
No external refs found!