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  5. Solyc01g112150.3.1

Solyc01g112150.3.1 (ATSLY1, Solyc01g112150)


Aliases : ATSLY1, Solyc01g112150

Description : SEC1 family transport protein SLY1 OS=Arabidopsis thaliana (sp|q9sl48|sly1_arath : 961.0)


Gene families : OG0004244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g112150.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G17980 ATSLY1 Sec1/munc18-like (SM) proteins superfamily 0.05 OrthoFinder output from all 47 species
Aop_g07437 ATSLY1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0021.g015708 ATSLY1 not classified & original description: CDS=1-2082 0.05 OrthoFinder output from all 47 species
Ceric.09G038700.1 ATSLY1, Ceric.09G038700 not classified & original description: pacid=50588187... 0.03 OrthoFinder output from all 47 species
Cre12.g521350 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g03913 ATSLY1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01023951001 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os03g42320.1 ATSLY1, LOC_Os03g42320 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Lfl_g01777 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_5013g0010 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp3g02060.1 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Msp_g12960 ATSLY1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02164 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08367 ATSLY1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014035 ATSLY1 not classified & original description: CDS=182-2014 0.02 OrthoFinder output from all 47 species
Sam_g15569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07440 ATSLY1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02049 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002799_P001 ATSLY1, Zm00001e002799 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 35 601
No external refs found!