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  5. Solyc01g107370.3.1

Solyc01g107370.3.1 (Solyc01g107370)


Aliases : Solyc01g107370

Description : GASA precursor polypeptide


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g107370.3.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00151p00069160 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
Ala_g34519 GASA1 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03520 GASA3 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41660 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g40327 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033563001 No alias Phytohormones.signalling peptides.CRP... 0.09 OrthoFinder output from all 47 species
Gb_12909 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Len_g45849 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
MA_132217g0010 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Msp_g12939 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17862 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27903 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01424 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24863 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Smo115445 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
Smo440818 No alias Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
Solyc02g089350.3.1 Solyc02g089350 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc12g042500.2.1 Solyc12g042500 GASA precursor polypeptide 0.05 OrthoFinder output from all 47 species
Spa_g04878 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38213 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41277 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 31 89
No external refs found!