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  5. Solyc01g103873.1.1

Solyc01g103873.1.1 (Solyc01g103873)


Aliases : Solyc01g103873

Description : transcription factor (bZIP)


Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g103873.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00186860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
AMTR_s04408p00000200 ATBZIP34,... RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
AT2G31370 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.07 OrthoFinder output from all 47 species
Adi_g008976 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g06520.1 SUE3, VIP1,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Lfl_g28477 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g071160.3.1 SUE3, VIP1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Solyc04g081190.3.1 Solyc04g081190 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Solyc11g020950.3.1 Solyc11g020950 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e021397_P001 Zm00001e021397 transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e035856_P001 Zm00001e035856 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e038237_P001 Zm00001e038237 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!