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  5. Solyc01g101020.4.1

Solyc01g101020.4.1 (SPT16, Solyc01g101020)


Aliases : SPT16, Solyc01g101020

Description : component SPT16 of FACT histone chaperone complex


Gene families : OG0002057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g101020.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00682p00010920 SPT16,... Chromatin organisation.histone chaperone activities.FACT... 0.05 OrthoFinder output from all 47 species
Adi_g077046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113333 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
Ala_g02640 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Als_g04476 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ceric.13G070600.1 SPT16, Ceric.13G070600 component *(SPT16) of FACT histone chaperone complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01031306001 SPT16 Chromatin organisation.histone chaperone activities.FACT... 0.04 OrthoFinder output from all 47 species
LOC_Os04g25550.1 SPT16, LOC_Os04g25550 component SPT16 of FACT histone chaperone complex 0.03 OrthoFinder output from all 47 species
MA_10427450g0010 SPT16 component SPT16 of FACT histone chaperone complex 0.03 OrthoFinder output from all 47 species
MA_10430230g0030 SPT16 component SPT16 of FACT histone chaperone complex 0.04 OrthoFinder output from all 47 species
Ore_g18292 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ore_g30315 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021592 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Smo170207 SPT16 Chromatin organisation.histone chaperone activities.FACT... 0.05 OrthoFinder output from all 47 species
Spa_g12849 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e013464_P001 SPT16, Zm00001e013464 component SPT16 of FACT histone chaperone complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR029148 FACT-Spt16_Nlobe 25 187
IPR013719 RTT106/SPT16-like_middle_dom 836 921
IPR000994 Pept_M24 204 433
IPR013953 FACT_Spt16 554 708
No external refs found!