1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g100720.3.1

Solyc01g100720.3.1 (IMPA-4, Solyc01g100720)


Aliases : IMPA-4, Solyc01g100720

Description : importin alpha adaptor proteins


Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100720.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G06720 IMPA-1, IMPA1,... importin alpha isoform 1 0.03 OrthoFinder output from all 47 species
Als_g03677 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Als_g06772 IMPA-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21187 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Azfi_s0067.g036207 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Cba_g11822 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
Ceric.17G010100.1 IMPA-3, MOS6,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
Cre04.g215850 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Dcu_g06329 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01028079001 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.07 OrthoFinder output from all 47 species
Gb_21890 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.03 OrthoFinder output from all 47 species
LOC_Os05g06350.1 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species
Lfl_g05459 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Msp_g09515 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006102 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Smo266556 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Zm00001e026752_P003 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006606 protein import into nucleus IEA Interproscan
MF GO:0061608 nuclear import signal receptor activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR002652 Importin-a_IBB 12 97
IPR000225 Armadillo 151 189
IPR000225 Armadillo 362 400
IPR000225 Armadillo 318 359
IPR000225 Armadillo 108 148
IPR000225 Armadillo 404 442
IPR000225 Armadillo 246 274
IPR000225 Armadillo 277 315
IPR000225 Armadillo 192 233
IPR032413 Arm_3 459 505
No external refs found!