- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc01g100500
Description : no hits & (original description: none)
Gene families : OG0004116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004116_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00098480 | evm_27.TU.AmTr_v1... | No description available | 0.07 | OrthoFinder output from all 47 species | |
| AT4G08580 | No alias | microfibrillar-associated protein-related | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g09408 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0043.g026943 | No alias | not classified & original description: CDS=1-1236 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g26770 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.34G063600.1 | Ceric.34G063600 | not classified & original description: pacid=50623043... | 0.1 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020539.41 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Cre05.g232950 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05082 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g17870.1 | LOC_Os02g17870 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os06g22850.2 | LOC_Os06g22850 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| MA_261g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g23320.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05563 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024108_P001 | Zm00001e024108 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009730 | MFAP1_C | 167 | 388 |
| No external refs found! |