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  5. Solyc01g099650.3.1

Solyc01g099650.3.1 (Solyc01g099650)


Aliases : Solyc01g099650

Description : group-I formin actin filament elongation factor


Gene families : OG0001137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g099650.3.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00097480 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00173780 AHF1, FH1, AFH1,... Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
AT3G25500 AHF1, FH1, AFH1, ATFH1 formin homology 1 0.02 OrthoFinder output from all 47 species
AT5G48360 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 OrthoFinder output from all 47 species
Adi_g014560 No alias group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Als_g37627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63528 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Aob_g20761 ATFH5, Fh5 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Ehy_g01646 No alias group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01031126001 No alias Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
GSVIVT01038194001 No alias Cytoskeleton.microfilament network.actin... 0.05 OrthoFinder output from all 47 species
LOC_Os02g50570.1 ATFH8, FH8,... group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g01070.1 ATFH5, Fh5,... group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g38810.1 LOC_Os04g38810 group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g34180.1 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor 0.04 OrthoFinder output from all 47 species
Len_g24532 ATFH5, Fh5 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Lfl_g05747 No alias group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
MA_10431990g0020 FH6, ATFH6 group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Msp_g41409 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Pir_g45335 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Pnu_g24377 No alias group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e012597_P001 FH6, ATFH6,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e028560_P002 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Zm00001e038766_P001 FH6, ATFH6,... group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 486 880
No external refs found!