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  5. Solyc01g097810.3.1

Solyc01g097810.3.1 (PDE181, ZDS, SPC1,...)


Aliases : PDE181, ZDS, SPC1, Solyc01g097810

Description : zeta-carotene desaturase (ZDS)


Gene families : OG0004455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g097810.3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Adi_g088498 PDE181, ZDS, SPC1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G066700.1 PDE181, ZDS,... zeta-carotene desaturase *(ZDS) & original description:... 0.06 OrthoFinder output from all 47 species
Cre07.g314150 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
Dde_g13728 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12341 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45433 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05500 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07998 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25901 No alias zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Smo146971 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Tin_g19386 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 89 553
No external refs found!