1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g096950.4.1

Solyc01g096950.4.1 (Solyc01g096950)


Aliases : Solyc01g096950

Description : component RBL of COMPASS histone trimethylation complex


Gene families : OG0004928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004928_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096950.4.1

Target Alias Description ECC score Gene Family Method Actions
AT3G21060 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g10230 No alias component *(RBL/SWD1) of COMPASS histone trimethylation... 0.04 OrthoFinder output from all 47 species
Aob_g06649 No alias component *(RBL/SWD1) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Gb_30454 No alias component RBL of COMPASS histone trimethylation complex 0.04 OrthoFinder output from all 47 species
LOC_Os03g10990.1 LOC_Os03g10990 component RBL of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
MA_826527g0010 No alias component RBL of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Mp2g01020.1 No alias component RBL of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Spa_g10803 No alias component *(RBL/SWD1) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 26 52
IPR001680 WD40_repeat 70 96
IPR001680 WD40_repeat 289 324
No external refs found!