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  5. Solyc01g096550.3.1

Solyc01g096550.3.1 (PRMT3, ATPRMT3, Solyc01g096550)


Aliases : PRMT3, ATPRMT3, Solyc01g096550

Description : ribosomal protein arginine N-methyltransferase (PRMT3)


Gene families : OG0001088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096550.3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT2G19670 PRMT1A, ATPRMT1A protein arginine methyltransferase 1A 0.03 OrthoFinder output from all 47 species
AT3G12270 PRMT3, ATPRMT3 protein arginine methyltransferase 3 0.14 OrthoFinder output from all 47 species
AT4G29510 ATPRMT11,... arginine methyltransferase 11 0.13 OrthoFinder output from all 47 species
Adi_g078470 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16146 ATPRMT6, PRMT6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22341 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009862 ATPRMT11,... histone methylase *(PRMT1) & original description: CDS=2-1123 0.03 OrthoFinder output from all 47 species
Azfi_s0553.g076649 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.07 OrthoFinder output from all 47 species
Ceric.05G067400.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.07 OrthoFinder output from all 47 species
Ceric.36G007700.1 ATPRMT11,... histone methylase *(PRMT1) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001049.36 PRMT1A, ATPRMT1A Probable protein arginine N-methyltransferase 1.2... 0.02 OrthoFinder output from all 47 species
Cre16.g685900 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.16 OrthoFinder output from all 47 species
Dcu_g01884 ATPRMT6, PRMT6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11233 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.04 OrthoFinder output from all 47 species
Dde_g04778 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036648001 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.18 OrthoFinder output from all 47 species
Gb_03001 ATPRMT6, PRMT6 Probable protein arginine N-methyltransferase 6... 0.06 OrthoFinder output from all 47 species
Gb_15769 ATPRMT11,... histone methylase (PRMT1) 0.04 OrthoFinder output from all 47 species
Gb_34867 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.06 OrthoFinder output from all 47 species
LOC_Os04g58060.1 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.1... 0.03 OrthoFinder output from all 47 species
LOC_Os07g44640.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.15 OrthoFinder output from all 47 species
LOC_Os09g19560.1 ATPRMT11,... histone methylase (PRMT1) 0.18 OrthoFinder output from all 47 species
LOC_Os10g34740.1 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.2... 0.02 OrthoFinder output from all 47 species
MA_4448g0020 ATPRMT11,... Probable protein arginine N-methyltransferase 1 OS=Oryza... 0.03 OrthoFinder output from all 47 species
MA_6268g0020 PRMT3, ATPRMT3 Probable protein arginine N-methyltransferase 3 OS=Oryza... 0.09 OrthoFinder output from all 47 species
Mp5g00320.1 ATPRMT11,... histone methylase (PRMT1) 0.06 OrthoFinder output from all 47 species
Mp5g14740.1 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.08 OrthoFinder output from all 47 species
Ore_g36048 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Sam_g09560 No alias histone methylase *(PRMT1) & original description: none 0.05 OrthoFinder output from all 47 species
Smo95789 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.05 OrthoFinder output from all 47 species
Spa_g12196 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05071 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033500_P001 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.12 OrthoFinder output from all 47 species
Zm00001e033907_P001 ATPRMT11,... histone methylase (PRMT1) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR041698 Methyltransf_25 292 407
IPR041661 ZN622/Rei1/Reh1_Znf-C2H2 47 121
No external refs found!