1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g096530.3.1

Solyc01g096530.3.1 (Solyc01g096530)


Aliases : Solyc01g096530

Description : component BET3 of TRAPP-I/II/III complex-shared components


Gene families : OG0004388 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004388_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096530.3.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Aev_g05098 No alias component *(BET3) of TRAPP-I/II/III complex-shared... 0.02 OrthoFinder output from all 47 species
Als_g00182 No alias component *(BET3) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Aop_g09204 No alias component *(BET3) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000402.27 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.02 OrthoFinder output from all 47 species
Dac_g09316 No alias component *(BET3) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Dcu_g04408 No alias component *(BET3) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
LOC_Os03g28400.1 LOC_Os03g28400 component BET3 of TRAPP-I/II/III complex-shared components 0.03 OrthoFinder output from all 47 species
LOC_Os07g44790.1 LOC_Os07g44790 component BET3 of TRAPP-I/II/III complex-shared components 0.03 OrthoFinder output from all 47 species
MA_10433808g0010 No alias component BET3 of TRAPP-I/II/III complex-shared components 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024850 No alias component *(BET3) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Smo152815 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.03 OrthoFinder output from all 47 species
Tin_g36684 No alias component *(BET3) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Zm00001e006626_P002 Zm00001e006626 component BET3 of TRAPP-I/II/III complex-shared components 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007194 TRAPP_component 24 170
No external refs found!