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  5. Solyc01g090870.1.1

Solyc01g090870.1.1 (ATOFP17, OFP17, Solyc01g090870)


Aliases : ATOFP17, OFP17, Solyc01g090870

Description : Transcription repressor OFP17 OS=Arabidopsis thaliana (sp|q84rf2|opf17_arath : 125.0)


Gene families : OG0009040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090870.1.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT1G06923 No alias BEST Arabidopsis thaliana protein match is: ovate family... 0.06 OrthoFinder output from all 47 species
AT1G15260 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
AT2G30395 ATOFP17, OFP17 ovate family protein 17 0.04 OrthoFinder output from all 47 species
AT3G16070 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
GSVIVT01024580001 ATOFP17, OFP17 Transcription repressor OFP17 OS=Arabidopsis thaliana 0.17 OrthoFinder output from all 47 species
Gb_11295 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Gb_11930 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g26210.1 ATOFP17, OFP17,... no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g48140.1 ATOFP17, OFP17,... Transcription repressor OFP17 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
MA_10431884g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10667g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_125197g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g082450.1.1 ATOFP17, OFP17,... Transcription repressor OFP17 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g33463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!