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  5. Solyc01g088700.4.1

Solyc01g088700.4.1 (CUM2, EIF4G, Solyc01g088700)


Aliases : CUM2, EIF4G, Solyc01g088700

Description : component eIF4G of eIF4F mRNA unwinding complex


Gene families : OG0001819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g088700.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00140630 CUM2, EIF4G,... Protein biosynthesis.translation initiation.mRNA... 0.07 OrthoFinder output from all 47 species
AT3G60240 CUM2, EIF4G No description available 0.06 OrthoFinder output from all 47 species
Adi_g008243 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g017175 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.09 OrthoFinder output from all 47 species
Adi_g054062 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g067767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077949 CUM2, EIF4G not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g077955 CUM2, EIF4G not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29067 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Aev_g34562 CUM2, EIF4G not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31996 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Als_g29126 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Aob_g02409 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.11 OrthoFinder output from all 47 species
Azfi_s0144.g051554 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Azfi_s0349.g066521 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g35184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37073 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.10G035100.1 CUM2, EIF4G,... component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.11 OrthoFinder output from all 47 species
Dac_g20523 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g20165 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Dde_g35168 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Ehy_g14202 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Ehy_g19202 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01018331001 CUM2, EIF4G Eukaryotic translation initiation factor 4G... 0.12 OrthoFinder output from all 47 species
Gb_05240 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.04 OrthoFinder output from all 47 species
LOC_Os07g36940.1 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.08 OrthoFinder output from all 47 species
Len_g14799 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.06 OrthoFinder output from all 47 species
Lfl_g10693 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.06 OrthoFinder output from all 47 species
MA_10434326g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_15224g0010 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.09 OrthoFinder output from all 47 species
Mp7g16900.1 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.04 OrthoFinder output from all 47 species
Msp_g13992 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Ore_g12926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16128 CUM2, EIF4G not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g23190 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g43539 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.06 OrthoFinder output from all 47 species
Ppi_g03290 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020804 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.07 OrthoFinder output from all 47 species
Spa_g18290 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Spa_g50993 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
Spa_g55699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010537_P001 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.14 OrthoFinder output from all 47 species
Zm00001e035213_P001 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 1625 1732
IPR003890 MIF4G-like_typ-3 1165 1388
No external refs found!