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Aliases : Solyc01g087430
Description : no hits & (original description: none)
Gene families : OG0004276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004276_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g087430.3.1 | |
| Cluster | HCCA: Cluster_155 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g021931 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g076898 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107182 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04865 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10021 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11408 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g11120 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g69271 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G090500.1 | Ceric.02G090500 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.27G068500.1 | Ceric.27G068500 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g09473 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g23595 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19588 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032131001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Gb_08461 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g34330.1 | LOC_Os12g34330 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Len_g20530 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| MA_76768g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g10850.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07738 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g17646 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32784 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13974 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Smo444121 | No alias | Probable tyrosine-protein phosphatase DSP2 OS=Oryza... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018296_P003 | Zm00001e018296 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | HCCA |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0031011 | Ino80 complex | IEP | HCCA |
| MF | GO:0031491 | nucleosome binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036260 | RNA capping | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0070568 | guanylyltransferase activity | IEP | HCCA |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0097346 | INO80-type complex | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1904949 | ATPase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |