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  5. Solyc01g081500.4.1

Solyc01g081500.4.1 (TFL2, LHP1, Solyc01g081500)


Aliases : TFL2, LHP1, Solyc01g081500

Description : modification reader component Pc of PRC1 histone mono-ubiquitination complex


Gene families : OG0001712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g081500.4.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT5G17690 TFL2, LHP1 like heterochromatin protein (LHP1) 0.04 OrthoFinder output from all 47 species
Adi_g058537 TFL2, LHP1 modification reader component *(LHP1) of PRC1 histone... 0.02 OrthoFinder output from all 47 species
Adi_g106142 TFL2, LHP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07728 TFL2, LHP1 modification reader component *(LHP1) of PRC1 histone... 0.02 OrthoFinder output from all 47 species
Ceric.37G067900.1 TFL2, LHP1,... modification reader component *(LHP1) of PRC1 histone... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000478.33 TFL2, LHP1 No description available 0.02 OrthoFinder output from all 47 species
Dac_g16643 TFL2, LHP1 modification reader component *(LHP1) of PRC1 histone... 0.03 OrthoFinder output from all 47 species
Ehy_g24344 TFL2, LHP1 modification reader component *(LHP1) of PRC1 histone... 0.02 OrthoFinder output from all 47 species
Mp7g13420.1 TFL2, LHP1 modification reader component Pc of PRC1 histone... 0.02 OrthoFinder output from all 47 species
Nbi_g01124 TFL2, LHP1 modification reader component *(LHP1) of PRC1 histone... 0.03 OrthoFinder output from all 47 species
Solyc10g024470.3.1 TFL2, LHP1,... modification reader component Pc of PRC1 histone... 0.05 OrthoFinder output from all 47 species
Spa_g07998 TFL2, LHP1 modification reader component *(LHP1) of PRC1 histone... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR023780 Chromo_domain 117 166
No external refs found!